Progress in Nuclear Polyhedrosis Virus Genomics

LUO Ji; ZHOU Guo-ying; ZHU Ji-yu

Volume 27 Issue 4

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Progress in Nuclear Polyhedrosis Virus Genomics

1.
Guangxi Zhuang Autonomous Region Forestry Research Institute, Nanning 530002, Guangxi, China
2.
College of Forestry, Central South University of Forestry and Technology, Changsha 410004, Hu'nan, China

Received Date: 2014-03-09

Abstract

Insect viruses are the microbes infecting arthropods only, including nuclear polyhedrosis virus, granulosis virus, cytoplasmic polyhedrosis virus, poxvirus, iridovirus and many other groups. The nuclear polyhedrosis virus belongs to Rhabdoviridae Nucleopolyhedrovirus, which is the largest group of insect viruses. It can infect and kill one or several agricultural and forestry pests specifically, and is harmless to the natural enemies, environment, human and animals. So it is considered as the environment-friendly biopesticides to be worth promoting. This paper reviews recent research on the genomics of nuclear polyhedrosis virus, and summarizes the main functional genes including transcription related genes, DNA replication related genes, structure related genes and other genes. Further more, future development direction of the nuclear polyhedrosis virus is also prospected.
- nuclear polyhedrosis virus,
- nucleopolyhedrovirus,
- genomics,
- biological control

References

[1]	Pringle C R. Virus taxonomy-1999. The universal system of virus taxonomy, updated to include the new proposals ratified by the International Committee on Taxonomy of Viruses during 1998[J]. Archives of Virology, 1999, 144(2): 421-429
[2]	Fujita R, Matsuyama T, Yamagishi J, et al. Expression of Autographa californica Multiple Nucleopolyhedrovirus Genes in Mammalian Cells and Upregulation of the Host β-Actin Gene[J]. Journal of Virology, 2006, 80(5): 2390-2395
[3]	Acharya A, Gopinathan K. Characterization of late gene expression factors lef-9 and lef-8 from Bombyx mori nucleopolyhedrovirus[J]. Journal of General Virology, 2002, 83(8): 2015-2023
[4]	Crouch E A, Cox L T, Morales K G, et al. Inter-subunit interactions of the Autographa californica M nucleopolyhedrovirus RNA polymerase[J]. Virology, 2007, 367(2): 265-274
[5]	Jose J, Jalali S K, Shivalingaswamy T M, et al. Molecular characterization of nucleopolyhedrovirus of three Lepidopteran pests using late expression factor-8 gene[J]. Indian Journal of Virology, 2013, 24(1): 59-65
[6]	Sehrawat S, Srinivasan N, Gopinathan K P. Functional characterization and structural modelling of late gene expression factor 4 from Bombyx mori nucleopolyhedrovirus[J]. Biochemical Journal, 2002, 368(1): 159-169
[7]	Guarino L A, Jin J, Dong W. Guanylyltransferase activity of the LEF-4 subunit of baculovirus RNA polymerase[J]. Journal of Virology, 1998, 72(12): 10003-10010
[8]	Jin J, Dong W, Guarino L A. The LEF-4 subunit of baculovirus RNA polymerase has RNA 5'-triphosphatase and ATPase activities[J]. Journal of Virology, 1998, 72(12): 10011-10019
[9]	Gross C H, Shuman S. RNA 5'-triphosphatase, nucleoside triphosphatase, and guanylyltransferase activities of baculovirus LEF-4 protein[J]. Journal of Virology, 1998, 72(12): 10020-10028
[10]	Taggart D J, Mitchell J K, Friesen P D. A conserved N-terminal domain mediates required DNA replication activities and phosphorylation of the transcriptional activator IE1 of Autographa californica multicapsid nucleopolyhedrovirus[J]. Journal of Virology, 2012, 86(12): 6575-6585
[11]	Schultz K, Wetter J, Fiore D, et al. Transactivator IE1 is required for baculovirus early replication events that trigger apoptosis in permissive and nonpermissive cells[J]. Journal of Virology, 2009, 83(1): 262-272
[12]	Su J, Lung O, Blissard G. The Autographa californica multiple nucleopolyhedrovirus lef-5 gene is required for productive infection[J]. Virology, 2011, 416(1-2): 54-64
[13]	Katsuma S, Shimada T. Bombyx mori nucleopolyhedrovirus ORF34 is required for efficient transcription of late and very late genes[J]. Virology, 2009, 392(2): 230-237
[14]	Xiao H, Qi Y. Genome sequence of Leucania seperata nucleopolyhedrovirus[J]. Virus Genes, 2007, 35(3): 845-856
[15]	杜超逸, 于威, 全滟平, 等. 利用Red重组系统敲除家蚕核型多角体病毒的 vlf-1 基因及对病毒复制的影响[J]. 蚕业科学, 2013, 39(2): 283-288
[16]	Liu L, Song H, Zhang L, et al. Expression, purification, and enzymatic characterization of Bombyx mori nucleopolyhedrovirus DNA polymerase[J]. Archives of Virology, 2013, 158(12): 2453-2463
[17]	Hang X, Guarino L. Purification of Autographa californica nucleopolyhedrovirus DNA polymerase from infected insect cells[J]. Journal of General Virology, 1999, 80(9): 2519-2526
[18]	Mcdougal V, Guarino L. Autographa californica nuclear polyhedrosis virus DNA polymerase: Measurements of processivity and strand displacement[J]. Journal of Virology, 1999, 73(6): 4908-4918
[19]	Huang J H, Levin D B. Expression, purification and characterization of the Spodoptera littoralis nucleopolyhedrovirus (SpliNPV) DNA polymerase and interaction with the SpliNPV non-hr origin of DNA replication[J]. Journal of General Virology, 2001, 82: 1767-1776
[20]	Feng G, Thumbi D K, De Jong J, et al. Selection and characterization of Autographa californica multiple nucleopolyhedrovirus DNA polymerase mutations[J]. Journal of Virology, 2012, 86(24): 13576-13588
[21]	Nie Y, Fang M, Theilmann D. AcMNPV AC16 (DA26, BV/ODV-E26) regulates the levels of IE0 and IE1 and binds to both proteins via a domain located within the acidic transcriptional activation domain[J]. Virology, 2009, 385(2): 484-495
[22]	Wu Y, Carstens E B. A baculovirus single-stranded DNA binding protein, LEF-3, mediates the nuclear localization of the putative helicase P143[J]. Virology, 1998, 247(1): 32-40
[23]	Yu M, Carstens E B. Identification of a domain of the baculovirus Autographa californica multiple nucleopolyhedrovirus single-strand DNA-binding protein LEF-3 essential for viral DNA replication[J]. Journal of Virology, 2010, 84(12): 6153-6162
[24]	刘艳荷, 方继朝. 斜纹夜蛾核型多角体病毒DNA解旋酶序列比较分析[J]. 江苏农业学报, 2013, 29(3): 496-501
[25]	Maeda S, Kamita S G, Kondo A. Host range expansion of Autographa californica nuclear polyhedrosis virus (NPV) following recombination of a 0.6-kilobase-pair DNA fragment originating from Bombyx mori NPV[J]. Journal of Virology, 1993, 67(10): 6234-6238
[26]	Jin B, Yoon H, Choudary P, et al. Characterization of recombinant Autographa californica nuclear polyhedrosis virus (NPV) expressing the beta-galactosidase gene in both Sf21 and Bm5 cells by Bombyx mori NPV p143 helicase gene[J]. Molecules and Cells, 1997, 7(6): 762-768
[27]	Kamita S, Maeda S. Sequencing of the putative DNA helicase-encoding of the Bombyx mori nuclear polyhedrosis virus and fine-mapping of a region involved in host range expansion[J]. Gene, 1997, 190(1): 173-179
[28]	吴小锋, 曹翠平, 许雅香, 等. BmNPV和AcNPV扩大寄主域杂交重组病毒表达载体的构建和改进术[J]. 中国科学C辑:生命科学, 2004, 34(2): 156-164
[29]	刘子夜, 齐义鹏, 王家旺, 等. 多角体蛋白的结构多样性和杆状病毒的进化研究[J]. 生物多样性, 1997, 5(1): 14-25
[30]	Cheng X H, Hillman C C, Zhang C X, et al. Reduction of polyhedrin mRNA and protein expression levels in Sf9 and Hi5 cell lines, but not in Sf21 cells, infected with Autographa californica multiple nucleopolyhedrovirus fp25k mutants[J]. Journal of General Virology, 2013, 94: 166-176
[31]	Bae S M, Kim H J, Lee J B, et al. Hyper-enhanced production of foreign recombinant protein by fusion with the partial polyhedrin of nucleopolyhedrovirus[J]. Plos One, 2013, 8(4)
[32]	Wu K, Feng J, Yao L, et al. Potential industrial production of foreign protein in silkworm using the collusion bodies of recombinant Bombyx mori (silkworm) multiple nucleopolyhedrovirus rescuesd by polyhedrin expressing stable cell line[J]. Journal of Chinese Biotechnology, 2010, 30(5): 96-102
[33]	Iizuka M, Tomita M, Shimizu K, et al. Translational enhancement of recombinant protein synthesis in transgenic silkworms by a 5'-untranslated region of polyhedrin gene of Bombyx mori nucleopolyhedrovirus[J]. Journal of Bioscience and Bioengineering, 2008, 105(6): 595-603
[34]	Tang Q, Li G, Yao Q, et al. Bm91 is an envelope component of ODV but is dispensable for the propagation of Bombyx mori nucleopolyhedrovirus[J]. Journal of Invertebrate Pathology, 2013, 113(1): 70-77
[35]	Tian C H, Tang X D, Xu H J, et al. Bombyx mori nucleopolyhedrovirus ORF51 encodes a budded virus envelope associated protein[J]. Virus Genes, 2009, 38(1): 171-177
[36]	Xu H J, Yang Z N, Wang F, et al. Bombyx mori nucleopolyhedrovirus ORF79 encodes a 28-kDa structural protein of the ODV envelope[J]. Archives of Virology, 2006, 151(4): 681-695
[37]	Xiang X, Chen L, Yu S, et al. Fusion expression of the Bombyx mori nucleopolyhedrovirus ODV envelope protein and immobilization of foreign protein into BmNPV polyhedra[J]. Acta Sericologica Sinica, 2010, 36(5): 785-791
[38]	Xiang X, Chen L, Guo A, et al. The Bombyx mori nucleopolyhedrovirus (BmNPV) ODV-E56 envelope protein is also a per os infectivity factor[J]. Virus Research, 2011, 155(1): 69-75
[39]	Zhou W K, Yao L G, Xu H, et al. The function of envelope protein P74 from Autographa californica multiple nucleopolyhedrovirus in primary infection to host[J]. Virus Genes, 2005, 30(2): 139-150
[40]	Tang P, Li Y, Qin Q, et al. Cloning, sequence analysis and protein tertiary structure prediction of 38k gene from Helicoverpa armigera multipie nuclear polyhedrosis virus[J]. Biotechnology Bulletin, 2009, (12): 65-67,83
[41]	费建明, 李兵, 沈卫德. 蓖麻蚕核型多角体病毒 p6.9 基因的克隆及序列分析[J]. 蚕业科学, 2007, 33(4): 610-613
[42]	Moscardi F. Asesment of the application of baculoviruses of control of Lepidopter[J]. Annual Review of Entomology, 1999, 44(1): 257-289
[43]	罗基同, 赵庭坤, 杨秀好. 松毛虫工程治理技术[J]. 广西林业科学, 2005, 34(1): 26-31

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通讯作者: 陈斌, bchen63@163.com

1.
沈阳化工大学材料科学与工程学院沈阳 110142

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Progress in Nuclear Polyhedrosis Virus Genomics

1. Guangxi Zhuang Autonomous Region Forestry Research Institute, Nanning 530002, Guangxi, China

2. College of Forestry, Central South University of Forestry and Technology, Changsha 410004, Hu'nan, China

Received Date: 2014-03-09

Abstract: Insect viruses are the microbes infecting arthropods only, including nuclear polyhedrosis virus, granulosis virus, cytoplasmic polyhedrosis virus, poxvirus, iridovirus and many other groups. The nuclear polyhedrosis virus belongs to Rhabdoviridae Nucleopolyhedrovirus, which is the largest group of insect viruses. It can infect and kill one or several agricultural and forestry pests specifically, and is harmless to the natural enemies, environment, human and animals. So it is considered as the environment-friendly biopesticides to be worth promoting. This paper reviews recent research on the genomics of nuclear polyhedrosis virus, and summarizes the main functional genes including transcription related genes, DNA replication related genes, structure related genes and other genes. Further more, future development direction of the nuclear polyhedrosis virus is also prospected.

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Reference (43)

[1]	Pringle C R. Virus taxonomy-1999. The universal system of virus taxonomy, updated to include the new proposals ratified by the International Committee on Taxonomy of Viruses during 1998[J]. Archives of Virology, 1999, 144(2): 421-429
[2]	Fujita R, Matsuyama T, Yamagishi J, et al. Expression of Autographa californica Multiple Nucleopolyhedrovirus Genes in Mammalian Cells and Upregulation of the Host β-Actin Gene[J]. Journal of Virology, 2006, 80(5): 2390-2395
[3]	Acharya A, Gopinathan K. Characterization of late gene expression factors lef-9 and lef-8 from Bombyx mori nucleopolyhedrovirus[J]. Journal of General Virology, 2002, 83(8): 2015-2023
[4]	Crouch E A, Cox L T, Morales K G, et al. Inter-subunit interactions of the Autographa californica M nucleopolyhedrovirus RNA polymerase[J]. Virology, 2007, 367(2): 265-274
[5]	Jose J, Jalali S K, Shivalingaswamy T M, et al. Molecular characterization of nucleopolyhedrovirus of three Lepidopteran pests using late expression factor-8 gene[J]. Indian Journal of Virology, 2013, 24(1): 59-65
[6]	Sehrawat S, Srinivasan N, Gopinathan K P. Functional characterization and structural modelling of late gene expression factor 4 from Bombyx mori nucleopolyhedrovirus[J]. Biochemical Journal, 2002, 368(1): 159-169
[7]	Guarino L A, Jin J, Dong W. Guanylyltransferase activity of the LEF-4 subunit of baculovirus RNA polymerase[J]. Journal of Virology, 1998, 72(12): 10003-10010
[8]	Jin J, Dong W, Guarino L A. The LEF-4 subunit of baculovirus RNA polymerase has RNA 5'-triphosphatase and ATPase activities[J]. Journal of Virology, 1998, 72(12): 10011-10019
[9]	Gross C H, Shuman S. RNA 5'-triphosphatase, nucleoside triphosphatase, and guanylyltransferase activities of baculovirus LEF-4 protein[J]. Journal of Virology, 1998, 72(12): 10020-10028
[10]	Taggart D J, Mitchell J K, Friesen P D. A conserved N-terminal domain mediates required DNA replication activities and phosphorylation of the transcriptional activator IE1 of Autographa californica multicapsid nucleopolyhedrovirus[J]. Journal of Virology, 2012, 86(12): 6575-6585
[11]	Schultz K, Wetter J, Fiore D, et al. Transactivator IE1 is required for baculovirus early replication events that trigger apoptosis in permissive and nonpermissive cells[J]. Journal of Virology, 2009, 83(1): 262-272
[12]	Su J, Lung O, Blissard G. The Autographa californica multiple nucleopolyhedrovirus lef-5 gene is required for productive infection[J]. Virology, 2011, 416(1-2): 54-64
[13]	Katsuma S, Shimada T. Bombyx mori nucleopolyhedrovirus ORF34 is required for efficient transcription of late and very late genes[J]. Virology, 2009, 392(2): 230-237
[14]	Xiao H, Qi Y. Genome sequence of Leucania seperata nucleopolyhedrovirus[J]. Virus Genes, 2007, 35(3): 845-856
[15]	杜超逸, 于威, 全滟平, 等. 利用Red重组系统敲除家蚕核型多角体病毒的 vlf-1 基因及对病毒复制的影响[J]. 蚕业科学, 2013, 39(2): 283-288
[16]	Liu L, Song H, Zhang L, et al. Expression, purification, and enzymatic characterization of Bombyx mori nucleopolyhedrovirus DNA polymerase[J]. Archives of Virology, 2013, 158(12): 2453-2463
[17]	Hang X, Guarino L. Purification of Autographa californica nucleopolyhedrovirus DNA polymerase from infected insect cells[J]. Journal of General Virology, 1999, 80(9): 2519-2526
[18]	Mcdougal V, Guarino L. Autographa californica nuclear polyhedrosis virus DNA polymerase: Measurements of processivity and strand displacement[J]. Journal of Virology, 1999, 73(6): 4908-4918
[19]	Huang J H, Levin D B. Expression, purification and characterization of the Spodoptera littoralis nucleopolyhedrovirus (SpliNPV) DNA polymerase and interaction with the SpliNPV non-hr origin of DNA replication[J]. Journal of General Virology, 2001, 82: 1767-1776
[20]	Feng G, Thumbi D K, De Jong J, et al. Selection and characterization of Autographa californica multiple nucleopolyhedrovirus DNA polymerase mutations[J]. Journal of Virology, 2012, 86(24): 13576-13588
[21]	Nie Y, Fang M, Theilmann D. AcMNPV AC16 (DA26, BV/ODV-E26) regulates the levels of IE0 and IE1 and binds to both proteins via a domain located within the acidic transcriptional activation domain[J]. Virology, 2009, 385(2): 484-495
[22]	Wu Y, Carstens E B. A baculovirus single-stranded DNA binding protein, LEF-3, mediates the nuclear localization of the putative helicase P143[J]. Virology, 1998, 247(1): 32-40
[23]	Yu M, Carstens E B. Identification of a domain of the baculovirus Autographa californica multiple nucleopolyhedrovirus single-strand DNA-binding protein LEF-3 essential for viral DNA replication[J]. Journal of Virology, 2010, 84(12): 6153-6162
[24]	刘艳荷, 方继朝. 斜纹夜蛾核型多角体病毒DNA解旋酶序列比较分析[J]. 江苏农业学报, 2013, 29(3): 496-501
[25]	Maeda S, Kamita S G, Kondo A. Host range expansion of Autographa californica nuclear polyhedrosis virus (NPV) following recombination of a 0.6-kilobase-pair DNA fragment originating from Bombyx mori NPV[J]. Journal of Virology, 1993, 67(10): 6234-6238
[26]	Jin B, Yoon H, Choudary P, et al. Characterization of recombinant Autographa californica nuclear polyhedrosis virus (NPV) expressing the beta-galactosidase gene in both Sf21 and Bm5 cells by Bombyx mori NPV p143 helicase gene[J]. Molecules and Cells, 1997, 7(6): 762-768
[27]	Kamita S, Maeda S. Sequencing of the putative DNA helicase-encoding of the Bombyx mori nuclear polyhedrosis virus and fine-mapping of a region involved in host range expansion[J]. Gene, 1997, 190(1): 173-179
[28]	吴小锋, 曹翠平, 许雅香, 等. BmNPV和AcNPV扩大寄主域杂交重组病毒表达载体的构建和改进术[J]. 中国科学C辑:生命科学, 2004, 34(2): 156-164
[29]	刘子夜, 齐义鹏, 王家旺, 等. 多角体蛋白的结构多样性和杆状病毒的进化研究[J]. 生物多样性, 1997, 5(1): 14-25
[30]	Cheng X H, Hillman C C, Zhang C X, et al. Reduction of polyhedrin mRNA and protein expression levels in Sf9 and Hi5 cell lines, but not in Sf21 cells, infected with Autographa californica multiple nucleopolyhedrovirus fp25k mutants[J]. Journal of General Virology, 2013, 94: 166-176
[31]	Bae S M, Kim H J, Lee J B, et al. Hyper-enhanced production of foreign recombinant protein by fusion with the partial polyhedrin of nucleopolyhedrovirus[J]. Plos One, 2013, 8(4)
[32]	Wu K, Feng J, Yao L, et al. Potential industrial production of foreign protein in silkworm using the collusion bodies of recombinant Bombyx mori (silkworm) multiple nucleopolyhedrovirus rescuesd by polyhedrin expressing stable cell line[J]. Journal of Chinese Biotechnology, 2010, 30(5): 96-102
[33]	Iizuka M, Tomita M, Shimizu K, et al. Translational enhancement of recombinant protein synthesis in transgenic silkworms by a 5'-untranslated region of polyhedrin gene of Bombyx mori nucleopolyhedrovirus[J]. Journal of Bioscience and Bioengineering, 2008, 105(6): 595-603
[34]	Tang Q, Li G, Yao Q, et al. Bm91 is an envelope component of ODV but is dispensable for the propagation of Bombyx mori nucleopolyhedrovirus[J]. Journal of Invertebrate Pathology, 2013, 113(1): 70-77
[35]	Tian C H, Tang X D, Xu H J, et al. Bombyx mori nucleopolyhedrovirus ORF51 encodes a budded virus envelope associated protein[J]. Virus Genes, 2009, 38(1): 171-177
[36]	Xu H J, Yang Z N, Wang F, et al. Bombyx mori nucleopolyhedrovirus ORF79 encodes a 28-kDa structural protein of the ODV envelope[J]. Archives of Virology, 2006, 151(4): 681-695
[37]	Xiang X, Chen L, Yu S, et al. Fusion expression of the Bombyx mori nucleopolyhedrovirus ODV envelope protein and immobilization of foreign protein into BmNPV polyhedra[J]. Acta Sericologica Sinica, 2010, 36(5): 785-791
[38]	Xiang X, Chen L, Guo A, et al. The Bombyx mori nucleopolyhedrovirus (BmNPV) ODV-E56 envelope protein is also a per os infectivity factor[J]. Virus Research, 2011, 155(1): 69-75
[39]	Zhou W K, Yao L G, Xu H, et al. The function of envelope protein P74 from Autographa californica multiple nucleopolyhedrovirus in primary infection to host[J]. Virus Genes, 2005, 30(2): 139-150
[40]	Tang P, Li Y, Qin Q, et al. Cloning, sequence analysis and protein tertiary structure prediction of 38k gene from Helicoverpa armigera multipie nuclear polyhedrosis virus[J]. Biotechnology Bulletin, 2009, (12): 65-67,83
[41]	费建明, 李兵, 沈卫德. 蓖麻蚕核型多角体病毒 p6.9 基因的克隆及序列分析[J]. 蚕业科学, 2007, 33(4): 610-613
[42]	Moscardi F. Asesment of the application of baculoviruses of control of Lepidopter[J]. Annual Review of Entomology, 1999, 44(1): 257-289
[43]	罗基同, 赵庭坤, 杨秀好. 松毛虫工程治理技术[J]. 广西林业科学, 2005, 34(1): 26-31

Progress in Nuclear Polyhedrosis Virus Genomics

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通讯作者: 陈斌, bchen63@163.com

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Progress in Nuclear Polyhedrosis Virus Genomics

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